PPDB

 The Plant Proteome Database

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AT4G01995.1   beta-carotene isomerase D27
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01995.3 11Arabidopsis thaliana7E-16222697970 (0)_
AT4G01995.2 11Arabidopsis thaliana6E-11917398990 (0)C
AT1G64680.1 11Arabidopsis thaliana3E-36229365520 (20)M
Os05g04070.1 7Oryza sativa1E-8522462751 (1)C
Os08g02210.1 7Oryza sativa8E-3523733520 (0)C
Os08g02210.2 7Oryza sativa8E-3523733520 (0)C
GRMZM2G125977_P01 3.21Zea mays3E-8822658751 (1)C
v1_GRMZM2G125977_P01 4a53Zea mays3E-8822658750 (0)C
Zm00001eb417120_P004 agpv5Zea mays3E-8822658750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Defensin_like(2) DUF4033(1)
TargetP: Chloroplast (Class 4 C0.615; M0.099; S0.276; _0.108)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 216)
Molecular Weight 28.64 kDA(-cTP 23.92)
PI 7.97(-cTP 5.25)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help