PPDB

The Plant Proteome Database

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AT4G01700.1   Chitinase family protein

Lab Annot. Chitinase protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02360.1 11Arabidopsis thaliana5E-15128172820 (0)S
AT1G02360.3 11Arabidopsis thaliana5E-15128172820 (0)_
AT1G02360.2 11Arabidopsis thaliana7E-15128172820 (0)_
Os01g18400.1 7Oryza sativa1E-12323468820 (0)S
Os06g51060.1 7Oryza sativa3E-10824559770 (0)M
Os05g04690.1 7Oryza sativa2E-10625860720 (0)M
Zm00001eb332350_P001 agpv5Zea mays7E-12623469820 (0)S
v1_GRMZM2G400497_P01 4a53Zea mays7E-12623469821 (1)S
GRMZM2G400497_P01 3.21Zea mays7E-12623469821 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_19(1) GSG-1(1)
TargetP: Secreted (Class 2 C0.012; M0.070; S0.935; _0.168)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 280 aa (-cTP 191)
Molecular Weight 31.46 kDA(-cTP )
PI 9.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2223Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help