PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G01540.1   NAC with transmembrane motif1

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01540.2 11Arabidopsis thaliana047389890 (0)_
AT4G01540.3 11Arabidopsis thaliana04041001000 (0)_
AT4G01540.4 11Arabidopsis thaliana03531001000 (0)_
Os08g44820.3 7Oryza sativa6E-3315343650 (0)_
Os06g01230.2 7Oryza sativa8E-3319636590 (0)_
Os06g01230.1 7Oryza sativa2E-3219636590 (0)_
Zm00001eb038920_P001 agpv5Zea mays6E-3215143650 (0)M
Zm00001eb415730_P004 agpv5Zea mays1E-3123436520 (0)_
GRMZM2G003715_P01 3.21Zea mays1E-3123436520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAM(2) Sporozoite_P67(1)
TargetP: Cytoplasm (Class 3 C0.072; M0.287; S0.078; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 473 aa (-cTP 440)
Molecular Weight 53.60 kDA(-cTP )
PI 5.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help