PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G01480.1   pyrophosphorylase 5

Lab Annot. ATPPA5 ( PYROPHOSPHORYLASE 5); inorganic diphosphatase/ pyrophosphatase
Mapman: 23.4.99 nucleotide metabolism.phosphotransfer and pyrophosphatases.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01480.2 11Arabidopsis thaliana5E-1612161001000 (0)_
AT1G01050.2 11Arabidopsis thaliana1E-14021489920 (0)M
AT1G01050.1 11Arabidopsis thaliana1E-140214899236 (23)M
Os05g36260.1 7Oryza sativa2E-12821580880 (0)_
Os10g26600.1 7Oryza sativa2E-12820183930 (0)_
Os04g59040.1 7Oryza sativa5E-12519882928 (8)_
Zm00001eb223280_P002 agpv5Zea mays2E-13019785950 (0)M
v1_GRMZM2G015418_P01 4a53Zea mays2E-130197859524 (22)M
GRMZM2G015418_P01 3.21Zea mays2E-130197859567 (24)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pyrophosphatase(1)
TargetP: Cytoplasm (Class 4 C0.262; M0.174; S0.083; _0.560)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 214)
Molecular Weight 24.71 kDA(-cTP )
PI 6.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1494Detail       leaf [A. thaliana]  
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

16247729(mature Pollen)
18538804(total leaf)
19546170(mature pollen grains)
17216043(leaf)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help