PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G01470.1   tonoplast intrinsic protein 1%3B3
Lab Annot.
Mapman: 34.19.2 transport.Major Intrinsic Proteins.TIP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36830.1 11Arabidopsis thaliana5E-1272527282433 (432)_
AT3G26520.1 11Arabidopsis thaliana3E-1212536979862 (822)_
AT3G16240.1 11Arabidopsis thaliana3E-9224757711053 (1037)S
Os01g74450.1 7Oryza sativa1E-12725274876 (6)_
Os03g05290.1 7Oryza sativa3E-1192527082126 (126)_
Os10g35050.1 7Oryza sativa2E-8925855720 (0)_
GRMZM2G168439_P01 3.21Zea mays4E-12525075866 (6)_
v1_GRMZM2G168439_P01 4a53Zea mays4E-12525075866 (0)_
Zm00001eb362170_P001 agpv5Zea mays4E-12525075860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF5592(2) MIP(1)
TargetP: Cytoplasm (Class 4 C0.179; M0.281; S0.019; _0.656)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 252 aa (-cTP 181)
Molecular Weight 25.91 kDA(-cTP )
PI 5.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help