PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G11660.1 11 Arabidopsis thaliana 3E-36 176 34 57 1 (1) M
AT3G52470.1 11 Arabidopsis thaliana 5E-36 187 32 55 1 (1) S
AT5G06330.1 11 Arabidopsis thaliana 1E-34 169 34 57 0 (0) _
Os05g30490.1 7 Oryza sativa 2E-43 212 36 55 0 (0) _
Os12g06260.1 7 Oryza sativa 6E-37 184 38 58 0 (0) _
Os11g05860.1 7 Oryza sativa 4E-35 209 35 55 4 (4) _
v1_GRMZM2G120983_P01 4a53 Zea mays 2E-34 175 34 56 12 (12) S
GRMZM5G800014_P01 3.21 Zea mays 2E-34 175 34 56 16 (16) S
Zm00001eb083540_P001 agpv5 Zea mays 2E-34 175 34 56 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LEA_2(1)
TargetP:	Cytoplasm (Class 2 C0.167; M0.042; S0.052; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	227 aa (-cTP 155)
Molecular Weight	24.45 kDA(-cTP )
PI	9.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21533090(plasmodesmata-crude)

Comparative Proteomics Data