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AT4G01400.2
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR
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| Lab Annot. |
Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.10) |
| Links |
POGS Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
COG4(1) DUF98(1) OTCace_N(1) Sec6(1) |
| TargetP: |
Cytoplasm (Class 2 C0.182; M0.085; S0.052; _0.901) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
738 aa (-cTP 728) |
| Molecular Weight |
82.98 kDA(-cTP ) |
| PI |
4.84(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2297 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2302 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2304 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2305 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2306 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2307 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2600 | Detail | | | | | | | | rosettes [A. thaliana] | total leaf tissue | fmtclpc1 |
| 2601 | Detail | | | | | | | | Rosettes [A. thaliana] | total leaf tissue | fmtclpc1 |
| 2604 | Detail | | | | | | | | Rosettes [A. thaliana] | Total leaf tissue | clpc1 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
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Comparative Proteomics Data
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