PPDB

PPDB	The Plant Proteome Database

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AT4G01400.1 oligomeric golgi complex subunit-like protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01400.3 10 Arabidopsis thaliana 0 466 100 100 0 (0) M
AT5G46100.1 11 Arabidopsis thaliana 2E-54 359 29 53 0 (0) _
AT1G07740.1 11 Arabidopsis thaliana 6E-52 419 28 47 0 (0) M
Os09g36230.1 7 Oryza sativa 3E-75 387 37 58 0 (0) _
Os04g52725.1 7 Oryza sativa 3E-43 363 26 47 0 (0) M
Os03g37260.1 7 Oryza sativa 4E-43 321 28 50 0 (0) C
GRMZM2G100058_P01 3.21 Zea mays 4E-75 256 44 66 0 (0) _
v1_GRMZM2G100058_P01 4a53 Zea mays 4E-75 256 44 66 0 (0) _
Zm00001eb319600_P001 agpv5 Zea mays 4E-75 256 44 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MRP-S27(3) PPR(8) PPR_1(7) PPR_2(8) PPR_3(5) PPR_long(3)
TargetP:	Mitochondria (Class 4 C0.184; M0.557; S0.028; _0.046)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	466 aa (-cTP 425)
Molecular Weight	53.25 kDA(-cTP )
PI	8.96(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1091	Detail								[A. thaliana]		R4Strep Complemented
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2287	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data