PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G01320.1 Peptidase family M48 family protein

Lab Annot.

ATSTE24 (M48A clade) - CAAX cleavage.
Mapman: 29.5.7.2.5* protein.degradation.metalloprotease.MA(M).M48

Curated Location

ER (Pubmed: 12039957 18641086 )

TAIR curated location: endoplasmic reticulum12039957

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01320.3 11 Arabidopsis thaliana 0 412 100 100 0 (0) _
AT4G01320.2 11 Arabidopsis thaliana 0 412 100 100 0 (0) _
Os02g45650.1 7 Oryza sativa 0 424 80 89 0 (0) S
GRMZM5G813909_P01 3.21 Zea mays 0 424 81 90 0 (0) _
v1_AC208833.3_FGP005 4a53 Zea mays 0 424 81 90 0 (0) _
Zm00001eb187240_P001 agpv5 Zea mays 0 424 81 90 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2268(1) DUF4538(1) Peptidase_M1(1) Peptidase_M48(1) Peptidase_M48_N(2) Peptid
TargetP:	Secreted (Class 4 C0.002; M0.036; S0.709; _0.434)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	5 TMs
TAT position:
Length	424 aa (-cTP 414)
Molecular Weight	48.48 kDA(-cTP )
PI	7.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data