PPDB

The Plant Proteome Database

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AT4G01290.1   chorismate synthase

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01290.2 11Arabidopsis thaliana099199994 (2)_
Os06g01680.1 7Oryza sativa2E-86107531441 (1)_
Os06g01680.3 7Oryza sativa1E-85107331441 (1)_
Os06g01680.4 7Oryza sativa3E-82101031441 (1)_
Zm00001eb374330_P002 agpv5Zea mays2E-86104931430 (0)_
v1_GRMZM2G467169_P02 4a53Zea mays3E-85106731431 (1)_
GRMZM2G467169_P02 3.21Zea mays3E-85106731432 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: IPP-2(1) Tricorn_PDZ(2)
TargetP: Cytoplasm (Class 1 C0.095; M0.047; S0.094; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 991 aa (-cTP 988)
Molecular Weight 108.55 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help