PPDB

PPDB	The Plant Proteome Database

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AT4G01270.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01245.1 11 Arabidopsis thaliana 2E-31 87 77 82 0 (0) S
AT5G41440.1 11 Arabidopsis thaliana 2E-06 54 42 53 0 (0) S
Os08g05560.1 7 Oryza sativa 7E-70 293 43 64 0 (0) _
GRMZM5G832300_P01 3.21 Zea mays 5E-59 306 42 61 0 (0) _
Zm00001eb416420_P004 agpv5 Zea mays 5E-59 306 42 61 0 (0) _
Zm00001eb416420_P001 agpv5 Zea mays 5E-59 306 42 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_binding(1) DUF4200(2) FANCL_C(1) FlaC_arch(2) KELK(2) Prok-RING_4(1) RIN
TargetP:	Cytoplasm (Class 3 C0.234; M0.033; S0.188; _0.753)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	506 aa (-cTP 484)
Molecular Weight	56.52 kDA(-cTP )
PI	8.44(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data