PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G01110.1   late embryogenesis abundant hydroxyproline-rich glycoprotein family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01453.1 11Arabidopsis thaliana4E-10726164800 (0)_
AT1G01453.2 11Arabidopsis thaliana3E-10425664800 (0)_
AT2G46300.1 11Arabidopsis thaliana3E-5125442592 (2)_
Os01g39290.1 7Oryza sativa1E-1118127450 (0)_
Os01g09880.1 7Oryza sativa3E-0815431422 (2)_
Os02g16030.1 7Oryza sativa3E-0717825420 (0)C
GRMZM2G096655_P01 3.21Zea mays6E-1719028450 (0)C
Zm00001eb357160_P001 agpv5Zea mays6E-1719028450 (0)C
v1_GRMZM2G096655_P01 4a53Zea mays6E-1719028450 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SNARE(1) YkuD(1)
TargetP: Cytoplasm (Class 5 C0.160; M0.338; S0.002; _0.418)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 261 aa (-cTP 213)
Molecular Weight 28.84 kDA(-cTP )
PI 10.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help