PPDB

PPDB	The Plant Proteome Database

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AT4G01020.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein

Lab Annot.

Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G10370.1 11 Arabidopsis thaliana 0 1775 94 97 0 (0) C
AT3G26560.1 11 Arabidopsis thaliana 1E-125 648 37 58 10 (2) _
AT4G16680.2 11 Arabidopsis thaliana 2E-111 699 35 52 0 (0) _
Os07g42900.1 7 Oryza sativa 0 1259 49 68 0 (0) _
Os02g19860.1 7 Oryza sativa 8E-123 646 37 58 5 (5) _
Os06g23530.1 7 Oryza sativa 2E-120 680 36 55 0 (0) M
Zm00001eb327760_P001 agpv5 Zea mays 0 1531 50 68 0 (0) _
GRMZM5G855311_P01 3.21 Zea mays 0 1720 46 63 0 (0) M
v1_GRMZM2G381488_P01 4a53 Zea mays 0 1458 50 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) AAA_29(1) AAA_30(1) ABC_tran(1) DEAD(1) HA2(1) Helicase_C(1)
TargetP:	Chloroplast (Class 3 C0.836; M0.268; S0.001; _0.066)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1787 aa (-cTP 1754)
Molecular Weight	202.13 kDA(-cTP 198.37)
PI	6.58(-cTP 6.41)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data