PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G01000.1 Ubiquitin-like superfamily protein

Lab Annot.

Ubiquitin-like protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01000.2 11 Arabidopsis thaliana 0 415 100 100 0 (0) _
AT3G06455.1 11 Arabidopsis thaliana 6E-120 408 60 66 0 (0) _
AT4G05320.7 11 Arabidopsis thaliana 7E-07 104 32 52 0 (0) _
Os01g48930.1 7 Oryza sativa 9E-78 448 39 55 0 (0) _
Os01g48930.2 7 Oryza sativa 3E-63 420 36 51 0 (0) _
Os03g50850.2 7 Oryza sativa 3E-09 60 48 71 0 (0) _
v1_GRMZM2G150160_P01 4a53 Zea mays 2E-79 462 38 54 0 (0) M
Zm00001eb156640_P002 agpv5 Zea mays 2E-79 462 38 54 0 (0) M
GRMZM2G150160_P01 3.21 Zea mays 2E-79 462 38 54 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cwf_Cwc_15(1) DNA_pack_C(1) Sde2_N_Ubi(1) SURF2(1) Telomere_Sde2_2(1) ubiquitin(
TargetP:	Cytoplasm (Class 5 C0.032; M0.176; S0.135; _0.352)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	415 aa (-cTP 401)
Molecular Weight	45.48 kDA(-cTP )
PI	6.53(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21173025(root proteome)

Comparative Proteomics Data