PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G00980.1 zinc knuckle (CCHC-type) family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G10920.1 11 Arabidopsis thaliana 6E-20 157 37 54 0 (0) _
AT4G10920.2 11 Arabidopsis thaliana 6E-20 157 37 54 0 (0) _
Os01g23090.1 7 Oryza sativa 4E-14 267 23 42 0 (0) _
Os01g50960.1 7 Oryza sativa 5E-14 173 31 47 7 (7) _
Os12g12180.1 7 Oryza sativa 9E-14 288 25 44 0 (0) S
GRMZM2G112535_P01 3.21 Zea mays 3E-10 177 29 46 4 (4) _
Zm00001eb361130_P001 agpv5 Zea mays 3E-10 177 29 46 0 (0) _
v1_GRMZM2G112535_P01 4a53 Zea mays 3E-10 177 29 46 4 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEK_C(1) PC4(1) Retrotran_gag_2(1) zf-CCHC(1) zf-CCHC_2(1) zf-CCHC_3(2) zf-CCHC_
TargetP:	Cytoplasm (Class 1 C0.078; M0.095; S0.059; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	488 aa (-cTP 394)
Molecular Weight	55.06 kDA(-cTP )
PI	7.96(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data