PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G00940.1   Dof-type zinc finger DNA-binding family protein
Lab Annot.
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
TAIR curated location: nucleus16581911
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00940.3 11Arabidopsis thaliana02941001000 (0)_
AT4G00940.2 11Arabidopsis thaliana02941001000 (0)_
AT3G61850.2 11Arabidopsis thaliana3E-4630438490 (0)C
Os03g55610.1 7Oryza sativa5E-297564760 (0)C
Os02g47810.1 7Oryza sativa2E-286277880 (0)_
Os01g64590.1 7Oryza sativa2E-275483920 (0)M
Zm00001eb250390_P002 agpv5Zea mays7E-3211055680 (0)_
v1_GRMZM2G171852_P01 4a53Zea mays8E-3211055680 (0)C
Zm00001eb250390_P005 agpv5Zea mays8E-3211055680 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Mucin(1) zf-Dof(1) Zn_Tnp_IS1(2) Zn_Tnp_IS1595(1)
TargetP: Cytoplasm (Class 2 C0.143; M0.128; S0.067; _0.876)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 294 aa (-cTP 244)
Molecular Weight 33.39 kDA(-cTP )
PI 6.99(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help