PPDB

 The Plant Proteome Database

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AT4G00830.3   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00830.5 11Arabidopsis thaliana04871001000 (0)_
AT4G00830.6 11Arabidopsis thaliana049598980 (0)_
AT4G00830.1 11Arabidopsis thaliana049598984 (0)_
Os11g14430.1 7Oryza sativa1E-13739557714 (4)_
Os11g14430.2 7Oryza sativa6E-13334758742 (2)_
Os10g06130.2 7Oryza sativa8E-133357577410 (10)_
Zm00001eb173880_P001 agpv5Zea mays3E-13743052670 (0)_
v1_GRMZM2G103430_P03 4a53Zea mays3E-137430526715 (15)_
v1_GRMZM2G103430_P01 4a53Zea mays3E-137430526715 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BUD22(1) Nup35_RRM_2(2) PHM7_cyt(4) RRM_1(3) RRM_3(2) RRM_5(2) RRM_7(3) RRM_occl
TargetP: Cytoplasm (Class 2 C0.122; M0.135; S0.117; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 487 aa (-cTP 461)
Molecular Weight 54.20 kDA(-cTP )
PI 4.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

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