PPDB

PPDB	The Plant Proteome Database

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AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G00830.6 11 Arabidopsis thaliana 0 495 100 100 0 (0) _
AT4G00830.2 11 Arabidopsis thaliana 0 495 100 100 0 (0) _
AT4G00830.4 11 Arabidopsis thaliana 0 496 98 98 0 (0) _
Os11g14430.1 7 Oryza sativa 3E-144 395 58 73 4 (4) _
Os11g14430.2 7 Oryza sativa 1E-139 347 60 76 2 (2) _
Os10g06130.2 7 Oryza sativa 2E-139 357 59 76 10 (10) _
Zm00001eb173880_P001 agpv5 Zea mays 9E-144 430 53 68 0 (0) _
v1_GRMZM2G103430_P03 4a53 Zea mays 9E-144 430 53 68 15 (15) _
v1_GRMZM2G103430_P01 4a53 Zea mays 9E-144 430 53 68 15 (15) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BRAP2(2) BUD22(1) DNA_topoisoIV(2) Nup35_RRM_2(2) PHM7_cyt(3) RRM_1(3) RRM_3(2)
TargetP:	Cytoplasm (Class 2 C0.122; M0.135; S0.117; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	495 aa (-cTP 469)
Molecular Weight	55.14 kDA(-cTP )
PI	4.60(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data