PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G00820.1   IQ-domain 17
Lab Annot.
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01110.2 11Arabidopsis thaliana055268750 (0)_
AT1G01110.1 11Arabidopsis thaliana5E-17437772790 (0)M
AT4G10640.1 11Arabidopsis thaliana1E-7655034500 (0)_
Os08g02250.1 7Oryza sativa8E-13258247600 (0)_
Os05g03190.1 7Oryza sativa2E-40502335022 (22)_
Os01g09790.1 7Oryza sativa3E-3635133490 (0)_
Zm00001eb173930_P001 agpv5Zea mays3E-9545748620 (0)M
v1_GRMZM2G162020_P01 4a53Zea mays3E-9545748620 (0)M
GRMZM2G162020_P01 3.21Zea mays3E-9545748620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4005(2) IQ(3)
TargetP: Mitochondria (Class 5 C0.166; M0.378; S0.022; _0.291)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 534 aa (-cTP 514)
Molecular Weight 60.00 kDA(-cTP )
PI 10.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help