PPDB

The Plant Proteome Database

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AT4G00540.1   myb domain protein 3r2

Lab Annot. myb domain protein 3r2
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00540.2 11Arabidopsis thaliana040599993 (3)_
AT4G32730.1 11Arabidopsis thaliana1E-6617759740 (0)_
AT5G11510.5 11Arabidopsis thaliana4E-6626146610 (0)_
Os12g13570.1 7Oryza sativa1E-6718060720 (0)C
Os01g62410.1 7Oryza sativa9E-6517560720 (0)C
Os01g12860.1 7Oryza sativa3E-5516257700 (0)_
Zm00001eb119340_P003 agpv5Zea mays2E-6818560710 (0)_
Zm00001eb119340_P005 agpv5Zea mays2E-6818560710 (0)_
Zm00001eb119340_P001 agpv5Zea mays2E-6818560710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5591(2) Myb_DNA-bind_4(3) Myb_DNA-bind_6(3) Myb_DNA-bind_7(1) Myb_DNA-binding
TargetP: Cytoplasm (Class 2 C0.210; M0.074; S0.058; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 437 aa (-cTP 397)
Molecular Weight 50.03 kDA(-cTP )
PI 9.22(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1177Detail       leaf [A. thaliana] co-IP OEC23 stromawild-type
1505Detail        [A. thaliana] wild-type
2166Detail       leaf [A. thaliana] stroma Clp stromaP5 trap-strepII

* For details about the exprimental sources click here.

Published Proteomics Data

21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help