PPDB

The Plant Proteome Database

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AT4G00430.2   plasma membrane intrinsic protein 1%3B4

Lab Annot. plasma membrane intrinsic protein 1;4
Mapman: 34.19.1 transport.Major Intrinsic Proteins.PIP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00430.1 11Arabidopsis thaliana3E-154214989975 (70)_
AT1G01620.1 11Arabidopsis thaliana1E-149214969796 (91)_
AT2G45960.2 11Arabidopsis thaliana2E-1462149297756 (728)_
Os04g47220.1 7Oryza sativa4E-1332158592242 (242)C
Os02g44630.3 7Oryza sativa8E-13222081890 (0)_
Os02g44630.1 7Oryza sativa4E-130216829080 (80)_
v1_GRMZM2G174807_P01 4a53Zea mays3E-131215849139 (39)_
Zm00001eb074210_P001 agpv5Zea mays3E-13121584910 (0)_
GRMZM2G174807_P01 3.21Zea mays3E-131215849158 (56)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MIP(1)
TargetP: Cytoplasm (Class 2 C0.058; M0.135; S0.040; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 6 TMs
TAT position:
Length 219 aa (-cTP 136)
Molecular Weight 23.33 kDA(-cTP )
PI 8.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2601Detail       Rosettes [A. thaliana] total leaf tissue fmtclpc1

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help