PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G00180.1 Plant-specific transcription factor YABBY family protein

Lab Annot.

YABBY family member
Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G00180.2 11 Arabidopsis thaliana 1E-150 209 97 97 0 (0) C
AT2G45190.1 11 Arabidopsis thaliana 6E-82 229 59 70 0 (0) _
AT1G08465.1 11 Arabidopsis thaliana 9E-56 211 48 62 0 (0) S
Os04g45330.1 7 Oryza sativa 1E-65 253 47 60 0 (0) _
Os02g42950.1 7 Oryza sativa 2E-62 233 50 61 0 (0) _
Os10g36420.1 7 Oryza sativa 3E-55 260 49 60 0 (0) C
Zm00001eb248640_P001 agpv5 Zea mays 5E-67 238 50 60 0 (0) S
v1_GRMZM2G167824_P01 4a53 Zea mays 6E-65 282 46 54 0 (0) _
GRMZM2G167824_P01 3.21 Zea mays 6E-65 282 46 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ccdc124(1) Elf1(1) HMG_box(1) HMG_box_2(1) Mu-like_Com(1) PRIMA1(2) YABBY(1) zf-
TargetP:	Chloroplast (Class 5 C0.574; M0.004; S0.021; _0.457)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	240 aa (-cTP 176)
Molecular Weight	26.34 kDA(-cTP 19.57)
PI	8.67(-cTP 9.76)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data