PPDB

PPDB	The Plant Proteome Database

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AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G00170.2 11 Arabidopsis thaliana 6E-157 212 100 100 0 (0) _
AT3G60600.1 11 Arabidopsis thaliana 4E-82 240 57 73 25 (22) _
AT2G45140.1 11 Arabidopsis thaliana 4E-78 240 56 72 36 (32) _
Os08g05890.1 7 Oryza sativa 4E-93 239 59 74 16 (16) _
Os04g45190.1 6 Oryza sativa 1E-79 252 52 71 7 (7) _
Os04g45190.2 6 Oryza sativa 3E-79 252 51 70 5 (5) _
GRMZM2G385989_P01 3.21 Zea mays 4E-95 235 61 76 9 (9) _
v1_GRMZM2G385989_P01 4a53 Zea mays 4E-95 235 61 76 0 (0) _
Zm00001eb416110_P001 agpv5 Zea mays 4E-95 235 61 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alpha_adaptinC2(2) Motile_Sperm(1) Uso1_p115_C(1)
TargetP:	Cytoplasm (Class 3 C0.320; M0.060; S0.055; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	239 aa (-cTP 166)
Molecular Weight	26.37 kDA(-cTP )
PI	6.75(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data