PPDB

PPDB	The Plant Proteome Database

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AT4G00070.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G00070.2 11 Arabidopsis thaliana 2E-100 172 89 91 0 (0) _
AT1G36950.1 11 Arabidopsis thaliana 5E-63 97 91 94 0 (0) _
AT1G17970.1 11 Arabidopsis thaliana 3E-28 91 53 71 0 (0) M
Os01g49770.2 7 Oryza sativa 7E-21 103 41 62 0 (0) S
Os01g49770.1 7 Oryza sativa 2E-20 97 42 62 0 (0) M
Os05g47670.1 7 Oryza sativa 8E-18 96 39 60 0 (0) _
GRMZM5G843389_P01 3.21 Zea mays 1E-21 96 42 63 0 (0) _
Zm00001eb156060_P002 agpv5 Zea mays 2E-21 96 42 64 0 (0) C
GRMZM2G122223_P01 3.21 Zea mays 2E-21 96 42 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3565(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_4(1) zf-rbx1(1) zf-R
TargetP:	Cytoplasm (Class 2 C0.109; M0.086; S0.176; _0.835)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	179 aa (-cTP 124)
Molecular Weight	20.77 kDA(-cTP )
PI	6.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data