PPDB

The Plant Proteome Database

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AT4G00030.1   Plastid-lipid associated protein PAP / fibrillin family protein

Lab Annot. fibrillin 9 (FBN9)
Mapman: 26.31* misc.fibrillins
Curated Location thylakoid-peripheral-stromal-side (Pubmed: 23198870 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g46610.2 7Oryza sativa4E-7217459724 (4)C
Os04g46610.1 7Oryza sativa4E-7217459724 (4)C
Os04g34460.1 7Oryza sativa3E-0618725430 (0)C
v1_GRMZM2G110657_P01 4a53Zea mays6E-7217459729 (9)C
Zm00001eb257570_P001 agpv5Zea mays6E-7217459720 (0)C
GRMZM2G110657_P01 3.21Zea mays6E-72174597210 (10)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAP_fibrillin(1) Tir_receptor_N(1)
TargetP: Chloroplast (Class 5 C0.728; M0.716; S0.013; _0.007)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 212 aa (-cTP 187)
Molecular Weight 24.07 kDA(-cTP 21.37)
PI 9.35(-cTP 6.61)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1676Detail       Rosettes [A. thaliana]  
2296Detail        [A. thaliana] Clp C1 WT
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help