PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G63530.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G63530.2 11 Arabidopsis thaliana 0 248 100 100 0 (0) _
AT3G19910.1 11 Arabidopsis thaliana 8E-34 111 54 72 0 (0) _
AT5G52140.1 11 Arabidopsis thaliana 2E-24 105 45 63 0 (0) _
Os03g07790.1 7 Oryza sativa 9E-80 248 50 64 0 (0) _
Os04g48260.1 7 Oryza sativa 5E-40 107 59 72 0 (0) _
Os09g35690.1 7 Oryza sativa 1E-36 109 55 72 0 (0) _
Zm00001eb402080_P003 agpv5 Zea mays 1E-78 241 50 65 0 (0) _
GRMZM2G141084_P01 3.21 Zea mays 1E-78 241 50 65 0 (0) _
Zm00001eb402080_P004 agpv5 Zea mays 4E-76 247 49 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3905(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf-C3H
TargetP:	Cytoplasm (Class 1 C0.078; M0.111; S0.097; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	248 aa (-cTP 204)
Molecular Weight	27.98 kDA(-cTP )
PI	4.71(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data