PPDB

 The Plant Proteome Database

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AT3G63470.1   serine carboxypeptidase-like 40
Lab Annot. serine carboxypeptidase-like 40
Mapman: 29.5.5.5.1* protein.degradation.serine protease.SC.S10
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52020.1 11Arabidopsis thaliana050056710 (0)S
AT3G52000.1 11Arabidopsis thaliana5E-17950352690 (0)S
AT2G05850.1 11Arabidopsis thaliana3E-17450550660 (0)S
Os07g46350.1 7Oryza sativa1E-17744555710 (0)S
Os02g42310.1 7Oryza sativa2E-152448486531 (31)S
Os01g06490.1 7Oryza sativa2E-151427496810 (10)S
Zm00001eb329580_P001 agpv5Zea mays6E-17646254680 (0)S
v1_GRMZM2G433767_P01 4a53Zea mays6E-176462546810 (10)S
GRMZM2G433767_P01 3.21Zea mays6E-17646254683 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4542(1) Peptidase_S10(1)
TargetP: Secreted (Class 2 C0.002; M0.165; S0.893; _0.030)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 502 aa (-cTP 434)
Molecular Weight 56.24 kDA(-cTP )
PI 8.56(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help