PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

OTP86 - PPR protein - editing rps14
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G63370.2 11 Arabidopsis thaliana 0 868 99 99 0 (0) C
AT3G57430.1 11 Arabidopsis thaliana 0 835 37 58 0 (0) C
AT4G13650.1 11 Arabidopsis thaliana 0 891 34 55 1 (1) _
Os04g39410.1 7 Oryza sativa 0 951 47 64 0 (0) M
Os01g25270.1 7 Oryza sativa 0 868 35 58 0 (0) M
Os09g07780.1 7 Oryza sativa 0 868 35 58 0 (0) M
Zm00001eb035760_P002 agpv5 Zea mays 0 900 35 56 0 (0) C
GRMZM2G076257_P01 3.21 Zea mays 0 900 35 56 26 (26) C
v1_GRMZM2G076257_P01 4a53 Zea mays 0 900 35 56 22 (22) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(2) DYW_deaminase(1) PPR(16) PPR_1(14) PPR_2(13) PPR_3(12) PPR_long(4) T
TargetP:	Chloroplast (Class 4 C0.336; M0.058; S0.059; _0.055)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	960 aa (-cTP 896) (-lTP 886)
Molecular Weight	107.52 kDA(-cTP 100.29)(-lTP 98.49)
PI	7.31(-cTP 6.76)(-lTP 8.153)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data