PPDB

PPDB	The Plant Proteome Database

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AT3G63130.1 RAN GTPase activating protein 1

Lab Annot.

RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator
Mapman: 30.5 signalling.G-proteins

Curated Location

nucleus (Pubmed: 12061901 )

TAIR curated location: nuclear envelope & cell plate15807788,0012061901

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G63130.2 11 Arabidopsis thaliana 0 535 100 100 36 (18) C
AT5G19320.1 11 Arabidopsis thaliana 0 487 63 80 2 (0) _
AT5G19320.2 11 Arabidopsis thaliana 0 487 63 80 0 (0) _
Os05g46560.1 7 Oryza sativa 0 542 62 78 46 (46) _
Os05g46560.2 7 Oryza sativa 0 542 62 78 46 (46) _
Os05g33870.1 7 Oryza sativa 2E-36 173 43 58 0 (0) _
Zm00001eb247310_P001 agpv5 Zea mays 0 513 61 78 0 (0) _
Zm00001eb184850_P001 agpv5 Zea mays 0 508 60 77 0 (0) C
v1_GRMZM2G079817_P01 4a53 Zea mays 0 508 60 77 37 (37) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4252(3) Glycos_transf_2(1) LRR_1(4) LRR_4(5) LRR_6(9) LRR_8(4) WPP(1)
TargetP:	Chloroplast (Class 4 C0.478; M0.242; S0.045; _0.212)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	535 aa (-cTP 510)
Molecular Weight	58.83 kDA(-cTP 55.96)
PI	4.63(-cTP 4.53)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1617	Detail								[A. thaliana]		m48
1618	Detail								[A. thaliana]		m48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data