PPDB

PPDB	The Plant Proteome Database

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AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40405.2 11 Arabidopsis thaliana 2E-163 566 44 62 0 (0) _
AT5G40405.1 11 Arabidopsis thaliana 2E-163 566 44 62 2 (2) _
AT5G48910.1 11 Arabidopsis thaliana 6E-161 580 42 62 4 (4) C
Os01g08120.1 7 Oryza sativa 3E-160 548 43 65 0 (0) M
Os07g02280.1 7 Oryza sativa 6E-154 515 45 63 0 (0) C
Os03g60690.1 7 Oryza sativa 4E-153 555 41 60 0 (0) C
GRMZM2G114572_P01 3.21 Zea mays 4E-167 554 44 63 0 (0) M
v1_GRMZM2G114572_P01 4a53 Zea mays 4E-167 554 44 63 0 (0) M
v1_GRMZM2G175253_P01 4a53 Zea mays 6E-157 494 44 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(3) DYW_deaminase(1) PPR(10) PPR_1(8) PPR_2(8) PPR_3(7) PPR_long(2) RPN7(
TargetP:	Chloroplast (Class 5 C0.242; M0.027; S0.173; _0.149)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	573 aa (-cTP 523)
Molecular Weight	64.95 kDA(-cTP 59.25)
PI	7.53(-cTP 6.60)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data