PPDB

The Plant Proteome Database

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AT3G62820.1   Plant invertase/pectin methylesterase inhibitor superfamily protein

Lab Annot. invertase/pectin methylesterase inhibitor protein
Mapman: 26.18 misc.invertase/pectin methylesterase inhibitor family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G47670.1 11Arabidopsis thaliana1E-6617262790 (0)S
AT5G62360.1 11Arabidopsis thaliana7E-2415932570 (0)_
AT5G20740.1 11Arabidopsis thaliana1E-2318930554 (0)S
Os10g36500.1 7Oryza sativa5E-1518822473 (3)S
Os10g36500.2 7Oryza sativa5E-1518822471 (1)S
Os03g18860.1 7Oryza sativa2E-1415731510 (0)S
GRMZM2G321870_P01 3.21Zea mays7E-1516032550 (0)S
Zm00001eb014020_P001 agpv5Zea mays7E-1516032550 (0)S
Zm00001eb014020_P007 agpv5Zea mays7E-1516032550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Acyltransf_C(1) PMEI(1)
TargetP: Secreted (Class 3 C0.167; M0.024; S0.626; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 194 aa (-cTP 127)
Molecular Weight 21.46 kDA(-cTP )
PI 9.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1114Detail        [A. thaliana] RARE1 co-IP rare-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help