PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G62280.1   GDSL-like Lipase/Acylhydrolase superfamily protein
Lab Annot.
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62280.2 11Arabidopsis thaliana029598980 (0)S
AT1G56670.1 11Arabidopsis thaliana4E-12335949660 (0)S
AT1G09390.1 11Arabidopsis thaliana1E-11636049671 (1)S
Os01g22780.2 7Oryza sativa1E-11732851660 (0)S
Os01g22660.1 7Oryza sativa4E-11533851653 (3)M
Os01g22640.1 7Oryza sativa7E-11132950650 (0)M
v1_GRMZM2G074517_P01 4a53Zea mays5E-11933852640 (0)M
GRMZM2G074517_P01 3.21Zea mays5E-11933852640 (0)M
Zm00001eb131140_P001 agpv5Zea mays7E-11933852640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 1 C0.011; M0.014; S0.982; _0.077)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 365 aa (-cTP 343)
Molecular Weight 40.80 kDA(-cTP )
PI 8.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help