PPDB

 The Plant Proteome Database

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AT3G62170.1   VANGUARD-like protein
Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G47040.1 11Arabidopsis thaliana061169820 (0)S
AT2G47030.1 11Arabidopsis thaliana060168810 (0)S
AT3G05610.1 11Arabidopsis thaliana2E-10759435540 (0)M
Os04g38560.1 7Oryza sativa2E-12555239560 (0)S
Os03g18860.1 7Oryza sativa2E-10857035530 (0)S
Os07g49100.1 7Oryza sativa9E-10057536520 (0)S
GRMZM2G012328_P01 3.21Zea mays1E-12655539569 (9)S
Zm00001eb080860_P002 agpv5Zea mays1E-12655539560 (0)S
Zm00001eb080860_P001 agpv5Zea mays1E-12655539560 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1664(1) Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 1 C0.006; M0.030; S0.975; _0.034)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 588 aa (-cTP 536)
Molecular Weight 62.96 kDA(-cTP )
PI 8.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 16247729(mature Pollen)
19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help