PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G62090.1   phytochrome interacting factor 3-like 2

Lab Annot.
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62090.2 11Arabidopsis thaliana03461001000 (0)_
AT3G62090.3 11Arabidopsis thaliana034693930 (0)_
AT3G62090.4 11Arabidopsis thaliana034693930 (0)_
Os01g18290.2 6Oryza sativa4E-2110747620 (0)_
Os01g18290.1 6Oryza sativa4E-219950640 (0)_
Os12g41650.3 7Oryza sativa5E-1911442570 (0)_
GRMZM2G387528_P02 3.21Zea mays4E-209949640 (0)_
Zm00001eb332400_P001 agpv5Zea mays4E-209949640 (0)_
v1_GRMZM2G115960_P02 4a53Zea mays6E-209948620 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cryptochrome_C(2) HLH(1)
TargetP: Cytoplasm (Class 4 C0.106; M0.333; S0.043; _0.633)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 346 aa (-cTP 278)
Molecular Weight 38.45 kDA(-cTP )
PI 6.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help