PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G62010.1 metal ion-binding protein

Lab Annot.

metal ion binding / oxidoreductase
Mapman: 29.4 protein.postranslational modification

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G62010.2 11 Arabidopsis thaliana 0 1254 99 99 28 (18) _
Os03g38970.1 7 Oryza sativa 0 1252 70 82 7 (7) _
GRMZM2G146819_P01 3.21 Zea mays 0 1253 70 81 16 (2) _
v1_GRMZM2G146819_P01 4a53 Zea mays 0 1253 70 81 1 (1) _
Zm00001eb049240_P002 agpv5 Zea mays 0 1253 70 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DSPc(2) PTPlike_phytase(3) TFIIE-A_C(3) Y_phosphatase(2) Y_phosphatase3(3)
TargetP:	Cytoplasm (Class 2 C0.193; M0.066; S0.043; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1254 aa (-cTP 1228)
Molecular Weight	141.55 kDA(-cTP )
PI	6.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2288	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2302	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data