PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G61890.1   homeobox 12

Lab Annot. homeodomain leucine zipper class I (HD-Zip I) protein
Mapman: 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family
Curated Location
TAIR curated location: nucleus15369784
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46680.1 11Arabidopsis thaliana4E-9026360710 (0)_
AT2G46680.2 11Arabidopsis thaliana1E-8626359700 (0)_
AT4G40060.1 11Arabidopsis thaliana1E-2810248720 (0)_
Os09g35910.1 7Oryza sativa4E-4111359820 (0)_
Os08g37580.1 7Oryza sativa4E-309251810 (0)_
Os04g45810.1 7Oryza sativa2E-299158800 (0)M
GRMZM2G041462_P01 3.21Zea mays4E-4010162850 (0)_
Zm00001eb319390_P001 agpv5Zea mays4E-4010162850 (0)_
v1_GRMZM2G041462_P01 4a53Zea mays4E-4010162850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG6_N(1) CENP-F_leu_zip(1) DUF4337(1) FlxA(2) Fungal_TACC(2) GBR_NSP5(2) HALZ(1
TargetP: Cytoplasm (Class 3 C0.266; M0.077; S0.088; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 235 aa (-cTP 184)
Molecular Weight 27.49 kDA(-cTP )
PI 5.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help