PPDB

PPDB	The Plant Proteome Database

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AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

TAIR curated location: spliceosome complex & nuclear speck15686520,15133128,8989882

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46610.1 11 Arabidopsis thaliana 3E-122 268 71 79 0 (0) _
AT2G46610.2 11 Arabidopsis thaliana 1E-101 238 68 78 0 (0) _
AT2G46610.3 11 Arabidopsis thaliana 2E-101 234 70 78 0 (0) S
Os04g02870.2 7 Oryza sativa 1E-94 214 67 81 0 (0) _
Os04g02870.1 7 Oryza sativa 1E-94 214 67 81 0 (0) _
Os02g03040.1 7 Oryza sativa 2E-88 279 57 70 0 (0) _
v1_GRMZM2G064612_P01 4a53 Zea mays 8E-92 266 59 70 2 (2) _
v1_GRMZM2G064612_P02 4a53 Zea mays 8E-92 266 59 70 2 (2) _
Zm00001eb404000_P002 agpv5 Zea mays 8E-92 266 59 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DbpA(2) DUF2129(2) Nup35_RRM_2(2) PHM7_cyt(2) RNA_bind(2) RRM_1(2) RRM_3(2) RRM_
TargetP:	Cytoplasm (Class 3 C0.026; M0.317; S0.089; _0.870)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	264 aa (-cTP 250)
Molecular Weight	31.15 kDA(-cTP )
PI	9.98(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data