PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G61850.3   Dof-type zinc finger DNA-binding family protein

Lab Annot.
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61850.1 11Arabidopsis thaliana02841001000 (0)_
AT3G61850.2 11Arabidopsis thaliana02841001000 (0)C
AT3G61850.4 11Arabidopsis thaliana031291910 (0)_
Os07g13260.1 7Oryza sativa5E-318857720 (0)_
Os05g36900.1 7Oryza sativa5E-306578860 (0)C
Os02g47810.1 7Oryza sativa7E-306576860 (0)_
v1_GRMZM2G171852_P01 4a53Zea mays2E-3625236460 (0)C
Zm00001eb250390_P005 agpv5Zea mays2E-3625236460 (0)C
GRMZM2G171852_P01 3.21Zea mays2E-3625236460 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-Dof(2) Zn_Tnp_IS1(1) Zn_Tnp_IS1595(1)
TargetP: Chloroplast (Class 3 C0.839; M0.026; S0.037; _0.372)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 284 aa (-cTP 249)
Molecular Weight 31.54 kDA(-cTP 27.64)
PI 9.51(-cTP 9.44)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help