PPDB

PPDB	The Plant Proteome Database

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AT3G61790.1 Protein with RING/U-box and TRAF-like domain

Lab Annot.

Protein with RING/U-box and TRAF-like domains
Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G27880.1 11 Arabidopsis thaliana 0 331 76 82 0 (0) _
AT3G58040.1 11 Arabidopsis thaliana 4E-164 277 77 86 0 (0) _
AT3G58040.3 11 Arabidopsis thaliana 4E-164 277 77 86 0 (0) _
Os02g19140.1 7 Oryza sativa 0 271 91 94 0 (0) _
Os05g14860.1 7 Oryza sativa 0 271 91 94 0 (0) _
Os01g13370.1 7 Oryza sativa 0 269 91 94 0 (0) _
GRMZM2G124915_P02 3.21 Zea mays 0 328 79 85 0 (0) _
v1_GRMZM2G124915_P02 4a53 Zea mays 0 328 79 85 0 (0) _
Zm00001eb237020_P001 agpv5 Zea mays 0 343 74 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FAIM1(1) Rad50_zn_hook(2) Sina(1) zf-C3HC4_2(1) zf-C3HC4_3(2) zf-RING_2(2) zf-RI
TargetP:	Cytoplasm (Class 2 C0.137; M0.052; S0.015; _0.936)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	326 aa (-cTP 282)
Molecular Weight	36.95 kDA(-cTP )
PI	6.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data