PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G61650.1 gamma-tubulin

Lab Annot.

gamma-tubulin
Mapman: 31.1 cell.organisation

Curated Location

TAIR curated location: mitochondrion & microtubule & cytoplasm14671022,15469496,16603653

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05620.1 11 Arabidopsis thaliana 0 474 98 99 9 (9) _
AT5G44340.1 11 Arabidopsis thaliana 1E-87 438 35 58 761 (499) _
AT4G20890.1 11 Arabidopsis thaliana 1E-86 438 35 58 563 (359) _
Os05g06450.2 7 Oryza sativa 0 473 92 95 6 (6) _
Os05g06450.1 7 Oryza sativa 0 473 92 95 6 (6) _
Os03g01530.1 7 Oryza sativa 9E-87 438 35 58 38 (38) _
Zm00001eb282650_P001 agpv5 Zea mays 0 473 91 95 0 (0) _
Zm00001eb282650_P002 agpv5 Zea mays 0 473 91 95 0 (0) _
GRMZM2G085970_P01 3.21 Zea mays 0 473 91 95 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Misat_Tub_SegII(1) Tubulin(1) Tubulin_2(1) Tubulin_C(1)
TargetP:	Cytoplasm (Class 3 C0.065; M0.251; S0.153; _0.781)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	474 aa (-cTP 467)
Molecular Weight	53.25 kDA(-cTP )
PI	5.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2287	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17317660(Plasma Membrane proteome)
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data