PPDB

The Plant Proteome Database

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AT3G61580.1   Fatty acid/sphingolipid desaturase

Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46210.1 11Arabidopsis thaliana044979891 (0)_
AT5G53560.1 11Arabidopsis thaliana8E-13764064196 (183)_
AT2G32720.1 11Arabidopsis thaliana6E-127540618 (8)_
Os09g16920.1 7Oryza sativa044356726 (6)C
Os05g01820.1 7Oryza sativa4E-1374456038 (38)_
Os01g73990.1 7Oryza sativa6E-1276405931 (31)_
GRMZM2G129453_P01 3.21Zea mays044955706 (6)_
Zm00001eb310330_P002 agpv5Zea mays044955700 (0)_
Zm00001eb310330_P001 agpv5Zea mays044955700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cyt-b5(1) FA_desaturase(2)
TargetP: Cytoplasm (Class 1 C0.066; M0.102; S0.125; _0.961)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 4 TMs
TAT position:
Length 449 aa (-cTP 447)
Molecular Weight 51.68 kDA(-cTP )
PI 8.50(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help