PPDB

PPDB	The Plant Proteome Database

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AT3G61550.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46160.2 11 Arabidopsis thaliana 3E-78 187 70 80 0 (0) _
AT2G46160.1 11 Arabidopsis thaliana 3E-78 187 70 80 0 (0) _
AT5G06490.1 11 Arabidopsis thaliana 5E-32 179 36 55 0 (0) _
Os01g53500.1 7 Oryza sativa 4E-50 199 50 63 0 (0) S
Os05g45060.1 7 Oryza sativa 2E-45 210 46 60 0 (0) S
Os12g04130.1 7 Oryza sativa 1E-26 180 37 52 0 (0) C
GRMZM2G482046_P01 3.21 Zea mays 1E-54 209 50 62 0 (0) S
v1_GRMZM2G482046_P01 4a53 Zea mays 1E-54 209 50 62 0 (0) S
Zm00001eb293470_P001 agpv5 Zea mays 1E-54 209 50 62 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C2HC5(1) zf-C3HC4(1)
TargetP:	Cytoplasm (Class 3 C0.102; M0.051; S0.020; _0.677)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	212 aa (-cTP 210)
Molecular Weight	23.22 kDA(-cTP )
PI	5.93(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data