PPDB

 The Plant Proteome Database

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AT3G61440.2   cysteine synthase C1
Lab Annot. cysteine synthase (O-acetylserine (thiol)-lyase/O-acetylserine sulfhydrylase/AtcysC1)
Mapman: 13.1.5.3.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL
Curated Location mitochondria (Pubmed: 10889265 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61440.1 11Arabidopsis thaliana0272100100480 (307)M
AT3G61440.3 11Arabidopsis thaliana0247100100153 (73)M
AT3G61440.4 11Arabidopsis thaliana4E-15721699990 (0)M
Os04g08350.2 7Oryza sativa6E-15327279898 (8)M
Os04g08350.1 7Oryza sativa5E-15027977870 (0)M
Os01g74650.3 7Oryza sativa7E-116268618278 (78)C
Zm00001eb088500_P003 agpv5Zea mays2E-15427279890 (0)M
Zm00001eb088500_P001 agpv5Zea mays4E-15427279890 (0)M
GRMZM2G036708_P01 3.21Zea mays4E-154272798985 (19)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PALP(1)
TargetP: Cytoplasm (Class 2 C0.152; M0.100; S0.053; _0.796)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 272 aa (-cTP 239)
Molecular Weight 29.23 kDA(-cTP )
PI 5.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1513Detail       leaf [A. thaliana] wild-type
1514Detail       leaf [A. thaliana] wild-type
1515Detail       leaf [A. thaliana] wild-type
1516Detail       leaf [A. thaliana] wild-type
1517Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1523Detail       leaf [A. thaliana] wild-type
1524Detail       leaf [A. thaliana] wild-type
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
1745Detail        [A. thaliana] Col-0
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1933Detail       leaf [A. thaliana] chloroplast wild-type
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2208Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII
2250Detail       seedlings [A. thaliana] total tissue atg5
2284Detail        [A. thaliana] Clp C1 WT
2291Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 18538804(total leaf)
18385124(mitochondria - leaf and suspension cell)
18431481(chloroplast)
18385124(mitochondria)
18814325(cotyledons)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
20601493(mitochondria (diurnal change))
20405473(roots - TRX-y interacting proteins)
19816138(rosette leaves)
19888209(80S polysomal fraction)
19888209(leaves)
19376835(leaf phosphoproteins)
19329564(peroxisomes (leaf))
20018591(weak Cu-2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
19423572(leaf (wt and clpr2-1))
19995723(chloroplast reference proteome)
21533090(plasmodesmata-crude)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21296373(mitochondria-root-leaf-differential)
21988472(vacuole (unfiltered data))
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

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