PPDB

PPDB	The Plant Proteome Database

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AT3G61415.1 SKP1-like 21

Lab Annot.

SKP1-like 21
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G61415.2 11 Arabidopsis thaliana 0 350 98 98 0 (0) _
AT2G45950.4 11 Arabidopsis thaliana 0 345 79 87 0 (0) _
AT2G45950.3 11 Arabidopsis thaliana 0 345 79 87 0 (0) _
Os03g01660.1 7 Oryza sativa 7E-143 353 63 76 0 (0) _
Os09g36830.1 7 Oryza sativa 6E-13 158 32 52 17 (17) _
Os09g10300.1 7 Oryza sativa 5E-12 148 32 54 0 (0) _
GRMZM2G109725_P01 3.21 Zea mays 1E-140 353 62 73 0 (0) _
v1_GRMZM2G109725_P02 4a53 Zea mays 1E-140 353 62 73 0 (0) _
v1_GRMZM2G109725_P01 4a53 Zea mays 1E-140 353 62 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Caskin-tail(1) Sigma70_r1_1(2) Skp1(1) Skp1_POZ(1)
TargetP:	Cytoplasm (Class 2 C0.051; M0.080; S0.209; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	351 aa (-cTP 274)
Molecular Weight	40.02 kDA(-cTP )
PI	5.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data