PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G61390.2   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61390.1 11Arabidopsis thaliana03631001000 (0)_
AT3G61390.4 11Arabidopsis thaliana03601001000 (0)_
AT3G61390.5 11Arabidopsis thaliana03381001000 (0)_
Os10g40490.1 7Oryza sativa2E-5442032540 (0)C
Os10g40120.1 7Oryza sativa7E-4742430480 (0)_
Os06g06760.3 7Oryza sativa1E-277367750 (0)_
Zm00001eb022920_P001 agpv5Zea mays5E-5544630490 (0)S
v1_GRMZM2G373329_P01 4a53Zea mays5E-5544630490 (0)S
GRMZM2G373329_P01 3.21Zea mays1E-4847728460 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4061(3) U-box(1) Usp(1) zf-NOSIP(2)
TargetP: Cytoplasm (Class 2 C0.088; M0.084; S0.165; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 435 aa (-cTP 421)
Molecular Weight 50.51 kDA(-cTP )
PI 8.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help