PPDB

PPDB	The Plant Proteome Database

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AT3G61240.2 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH12)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G61240.1 11 Arabidopsis thaliana 0 498 100 100 65 (9) M
AT2G45810.1 11 Arabidopsis thaliana 0 528 79 84 104 (24) _
AT4G00660.2 11 Arabidopsis thaliana 0 507 79 87 37 (6) M
Os04g45040.1 7 Oryza sativa 0 500 77 85 8 (8) _
Os04g45040.3 7 Oryza sativa 0 500 77 85 8 (8) _
Os04g45040.2 7 Oryza sativa 0 500 77 85 8 (8) _
v1_GRMZM2G129007_P01 4a53 Zea mays 0 442 80 89 5 (5) _
Zm00001eb044130_P002 agpv5 Zea mays 0 442 80 89 0 (0) _
Zm00001eb044130_P001 agpv5 Zea mays 0 442 80 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(2) TFIIA(1)
TargetP:	Mitochondria (Class 5 C0.045; M0.635; S0.010; _0.630)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	498 aa (-cTP 408)
Molecular Weight	56.77 kDA(-cTP )
PI	8.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data