PPDB

The Plant Proteome Database

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AT3G61200.1   Thioesterase superfamily protein

Lab Annot. thioesterase protein
Mapman: 35.1 not assigned.no ontology
Curated Location peroxisome (Pubmed: 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04290.1 11Arabidopsis thaliana9E-1412032553 (0)_
Os07g27960.1 7Oryza sativa1E-3110950710 (0)_
Os07g27870.1 7Oryza sativa9E-3110949700 (0)C
Os01g65950.1 7Oryza sativa9E-1013035530 (0)_
GRMZM2G125175_P01 3.21Zea mays9E-2512842710 (0)_
Zm00001eb306670_P001 agpv5Zea mays9E-2512842710 (0)_
v1_GRMZM2G125175_P01 4a53Zea mays9E-2512842710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 4HBT(1) 4HBT_3(2) DUF4442(2) Ribosomal_L21p(1)
TargetP: Cytoplasm (Class 1 C0.033; M0.123; S0.016; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 188 aa (-cTP 147)
Molecular Weight 20.47 kDA(-cTP )
PI 6.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data


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