PPDB

PPDB	The Plant Proteome Database

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AT3G61200.1 Thioesterase superfamily protein

Lab Annot.

thioesterase protein
Mapman: 35.1 not assigned.no ontology

Curated Location

peroxisome (Pubmed: 21472859 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G04290.1 11 Arabidopsis thaliana 9E-14 120 32 55 3 (0) _
Os07g27960.1 7 Oryza sativa 1E-31 109 50 71 0 (0) _
Os07g27870.1 7 Oryza sativa 9E-31 109 49 70 0 (0) C
Os01g65950.1 7 Oryza sativa 9E-10 130 35 53 0 (0) _
GRMZM2G125175_P01 3.21 Zea mays 9E-25 128 42 71 5 (0) _
Zm00001eb306670_P001 agpv5 Zea mays 9E-25 128 42 71 0 (0) _
v1_GRMZM2G125175_P01 4a53 Zea mays 9E-25 128 42 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	4HBT(1) 4HBT_3(2) DUF4442(2) Ribosomal_L21p(1)
TargetP:	Cytoplasm (Class 1 C0.033; M0.123; S0.016; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	188 aa (-cTP 147)
Molecular Weight	20.47 kDA(-cTP )
PI	6.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
311	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-his6
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1461	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 1)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2287	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data