PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G61180.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G11680.1 11 Arabidopsis thaliana 3E-131 380 54 66 0 (0) C
AT4G11680.2 11 Arabidopsis thaliana 7E-125 412 50 62 0 (0) C
AT1G63170.1 11 Arabidopsis thaliana 2E-122 350 58 71 0 (0) C
Os02g45240.1 7 Oryza sativa 4E-126 342 55 69 0 (0) C
Os07g27950.2 7 Oryza sativa 2E-115 329 58 69 0 (0) C
Os07g27950.1 7 Oryza sativa 1E-113 330 57 69 0 (0) C
Zm00001eb096500_P001 agpv5 Zea mays 2E-126 334 55 68 0 (0) C
GRMZM2G139941_P03 3.21 Zea mays 2E-119 364 54 67 0 (0) C
v1_GRMZM2G139941_P03 4a53 Zea mays 2E-119 364 54 67 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(2) zf-rbx1(1) zf-R
TargetP:	Chloroplast (Class 1 C0.993; M0.014; S0.015; _0.129)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	5 TMs
Aramemnon:	4 TMs
TAT position:
Length	379 aa (-cTP 317)
Molecular Weight	42.49 kDA(-cTP 35.53)
PI	4.99(-cTP 4.50)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)

Comparative Proteomics Data