PPDB

The Plant Proteome Database

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AT3G61140.1   COP9 signalosome complex subunit 1

Lab Annot. FUS6 (FUSCA 6)
Mapman: 30.11.1 signalling.light.COP9 signalosome
Curated Location
TAIR curated location: signalosome complex & nucleus8953769,11019806
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12850.1 11Arabidopsis thaliana8E-1731926430 (0)_
AT4G24820.1 11Arabidopsis thaliana2E-151982645285 (161)_
AT4G24820.2 11Arabidopsis thaliana2E-151982645285 (161)_
Os03g02540.1 7Oryza sativa042371852 (2)_
Os02g38810.1 7Oryza sativa2E-15198264510 (10)_
Os04g40850.1 7Oryza sativa6E-15311224126 (26)_
GRMZM2G062210_P01 3.21Zea mays0410718656 (6)_
Zm00001eb001110_P001 agpv5Zea mays041071860 (0)_
v1_GRMZM2G062210_P01 4a53Zea mays0410718610 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCI(2) RPN7(1)
TargetP: Cytoplasm (Class 3 C0.369; M0.068; S0.074; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 441 aa (-cTP 438)
Molecular Weight 50.58 kDA(-cTP )
PI 6.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help