PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G61130.1   galacturonosyltransferase 1

Lab Annot. galacturonosyltransferase 1
Mapman: 26.2 misc.UDP glucosyl and glucoronyl transferases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38270.2 11Arabidopsis thaliana061057750 (0)S
AT4G38270.1 11Arabidopsis thaliana061456751 (1)S
AT2G46480.3 11Arabidopsis thaliana052863790 (0)_
Os09g36190.1 7Oryza sativa065273841 (1)_
Os09g36190.2 7Oryza sativa065073841 (1)_
Os06g49810.1 7Oryza sativa056775870 (0)S
GRMZM2G386971_P01 3.21Zea mays064872830 (0)M
v1_GRMZM2G386971_P01 4a53Zea mays064872830 (0)M
Zm00001eb319550_P001 agpv5Zea mays064872830 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_transf_24(1) Glyco_transf_8(1)
TargetP: Mitochondria (Class 2 C0.030; M0.873; S0.022; _0.155)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 673 aa (-cTP 659)
Molecular Weight 77.37 kDA(-cTP )
PI 9.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1596Detail        [A. thaliana]  
1597Detail        [A. thaliana]  
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help